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Bioedit Company clustalw multiple sequence alignment tool
Clustalw Multiple Sequence Alignment Tool, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/clustalw+multiple+sequence+alignment/alignment+clustalw+multiple+tool/pm42086624-104-7-13
Average 86 stars, based on 1 article reviews
clustalw multiple sequence alignment tool - by Bioz Stars, 2026-09
86/100 stars

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Sequencing:

Article Title: The <i>SGE1</i> Homolog of <i>Fusarium oxysporum</i> f. sp. <i>rapae</i> Is a Pathogenicity Factor and Required for Full Stress Resistance of Chlamydospores
Article Snippet: Fusarium oxysporum f. sp. conglutinans, F. oxysporum f. sp. rapae, F. oxysporum f. sp. raphani, and F. oxysporum f. sp. matthiolae can cause yellows disease of the economically important species in Brassicaceae family.. Among these, F. oxysporum f. sp. rapae induces yellows in leaf mustard and Chinese cabbage.. SGE1 (SIX gene expression 1) is a transcription factor characterized by the presence of the WOPR box domain.

Article Title: A manually driven centrifugal microfluidic LAMP platform for rapid visual detection of waterborne pathogens in aquatic sports.
Article Snippet: .. The relevant gene sequences were sourced from the NCBI NT database, and ClustalW multiple sequence alignment was performed via BioEdit (Version 7.2.5; https://bioedit.software.informer.com/) software to identify conserved regions. ..

Article Title: Prevalence and diversity of Helicobacter species in captive wild carnivores, and their implications for conservation management of endangered species
Article Snippet: .. ClustalW multiple sequence alignment was performed in BioEdit [ ]. .. A neighbour-joining (NJ) tree [ ] was constructed in MEGA7 software [ ] using K2-P distances among sequences (all trimmed to a length of 323 bp) with 1000 bootstraps [ ] combining (i) 59 unambiguous sequences from samples in this study (i.e. excluding heterozygous sequences indicating multiple infections with more than one strain or species), (ii) 15 sequences of Helicobacter species known to occur in diverse mammalian species, Type strain: H. pylori strain MDA-1397 ( HQ266659.1 ), H. canadensis ( AF262037.1 ), H. canis strain ATCC 51401 ( AY631945.1 ), H. cholecystus strain ATCC 700242 ( AY686606.1 ), H. sp. Flexispira taxon 1 strain ATCC 43968 ( U96300.1 ), H. ganmani strain MIT 99-5102 ( AY631951.1 ), H. hepaticus strain Hh-2 ( U07574.2 ), H. sp. MIT 98-6070 ( AF333341.1 ), H. muridarum strain ST1 ( M80205.2 ), H. pametensis strain B9A Seymour ( M88147.2 ), H. rodentium ( U96296.1 ), H. saguini strain MIT 97-6194-5 ( AF107494.1 ), H. sp. B52D Seymour ( M88144.3 ), H. typhlonius strain MIT 97-6810 ( AF127912.1 ), H. acinonychis strain Eaton 90-119-3 ( NR_025940.1 )) [ ] and (iii) 24 sequences showing high similarity (≥ 98% identity in BLAST searches) with the sequences obtained in this study, including four publicly available uncultured Helicobacter sequences retrieved from NCBI GenBank, mainly to signify the host origin of these isolates.

Article Title: A manually driven centrifugal microfluidic LAMP platform for rapid visual detection of waterborne pathogens in aquatic sports
Article Snippet: .. The relevant gene sequences were sourced from the NCBI NT database, and ClustalW multiple sequence alignment was performed via BioEdit (Version 7.2.5; https://bioedit.software.informer.com/ ) software to identify conserved regions. ..

Article Title: Molecular detection of SARS-CoV-2 and medically important respiratory and gastrointestinal virus pathogens on Thai currency.
Article Snippet: .. The viral sequences were aligned using ClustalW multiple sequence alignment in the BioEdit version 7.0.5.226, and a phylogenetic tree was constructed using MEGA 7.0.26 software (https://megasoftware.net/)27. ..

Article Title: Molecular Surveillance and Genotypic Distribution of Rotavirus A, Norovirus GI and GII in Bangkok Wastewater Treatment Plants During COVID-19 Phase in 2023, Thailand.
Article Snippet: Gastrointestinal tract infections by enteric viruses are a major public health concerns, primarily causing significant morbidity and mortality worldwide.. Multiple viruses including rotavirus (RV), norovirus (NV), astrovirus (AV), sapovirus (SV), and enteric adenovirus (AdV) are wellrecognized as foodborne and waterborne pathogens causing clinical symptoms related to diarrhea, nausea, vomiting, abdominal pain and sometime fever (Bányai et al., 2018; Makimaa et al., 2020).. They typically transmitted through fecal-oral route, respiratory droplet from direct close contact with an infected person, and often by fomite-mediated transmission via contaminated surface environment (Bányai et al., 2018; Makimaa et al., 2020; Boone & Gerba, 2007).

Article Title: Molecular detection of SARS-CoV-2 and medically important respiratory and gastrointestinal virus pathogens on Thai currency
Article Snippet: .. The viral sequences were aligned using ClustalW multiple sequence alignment in the BioEdit version 7.0.5.2 , and a phylogenetic tree was constructed using MEGA 7.0.26 software ( https://megasoftware.net/ ) . ..

Article Title: The Leray-XT COI primer pair is not suitable for observing ciliates and radiolarians
Article Snippet: .. From each of the selected mitochondrial genome sequences, the COI gene region was extracted and, together with the eleven selected COI sequences, a ClustalW ( ) multiple sequence alignment was generated in Bioedit. ..

Software:

Article Title: A manually driven centrifugal microfluidic LAMP platform for rapid visual detection of waterborne pathogens in aquatic sports
Article Snippet: .. The relevant gene sequences were sourced from the NCBI NT database, and ClustalW multiple sequence alignment was performed via BioEdit (Version 7.2.5; https://bioedit.software.informer.com/ ) software to identify conserved regions. ..

Article Title: Molecular detection of SARS-CoV-2 and medically important respiratory and gastrointestinal virus pathogens on Thai currency.
Article Snippet: .. The viral sequences were aligned using ClustalW multiple sequence alignment in the BioEdit version 7.0.5.226, and a phylogenetic tree was constructed using MEGA 7.0.26 software (https://megasoftware.net/)27. ..

Article Title: Molecular Surveillance and Genotypic Distribution of Rotavirus A, Norovirus GI and GII in Bangkok Wastewater Treatment Plants During COVID-19 Phase in 2023, Thailand.
Article Snippet: Gastrointestinal tract infections by enteric viruses are a major public health concerns, primarily causing significant morbidity and mortality worldwide.. Multiple viruses including rotavirus (RV), norovirus (NV), astrovirus (AV), sapovirus (SV), and enteric adenovirus (AdV) are wellrecognized as foodborne and waterborne pathogens causing clinical symptoms related to diarrhea, nausea, vomiting, abdominal pain and sometime fever (Bányai et al., 2018; Makimaa et al., 2020).. They typically transmitted through fecal-oral route, respiratory droplet from direct close contact with an infected person, and often by fomite-mediated transmission via contaminated surface environment (Bányai et al., 2018; Makimaa et al., 2020; Boone & Gerba, 2007).

Article Title: Molecular detection of SARS-CoV-2 and medically important respiratory and gastrointestinal virus pathogens on Thai currency
Article Snippet: .. The viral sequences were aligned using ClustalW multiple sequence alignment in the BioEdit version 7.0.5.2 , and a phylogenetic tree was constructed using MEGA 7.0.26 software ( https://megasoftware.net/ ) . ..

Construct:

Article Title: Molecular detection of SARS-CoV-2 and medically important respiratory and gastrointestinal virus pathogens on Thai currency.
Article Snippet: .. The viral sequences were aligned using ClustalW multiple sequence alignment in the BioEdit version 7.0.5.226, and a phylogenetic tree was constructed using MEGA 7.0.26 software (https://megasoftware.net/)27. ..

Article Title: Molecular Surveillance and Genotypic Distribution of Rotavirus A, Norovirus GI and GII in Bangkok Wastewater Treatment Plants During COVID-19 Phase in 2023, Thailand.
Article Snippet: Gastrointestinal tract infections by enteric viruses are a major public health concerns, primarily causing significant morbidity and mortality worldwide.. Multiple viruses including rotavirus (RV), norovirus (NV), astrovirus (AV), sapovirus (SV), and enteric adenovirus (AdV) are wellrecognized as foodborne and waterborne pathogens causing clinical symptoms related to diarrhea, nausea, vomiting, abdominal pain and sometime fever (Bányai et al., 2018; Makimaa et al., 2020).. They typically transmitted through fecal-oral route, respiratory droplet from direct close contact with an infected person, and often by fomite-mediated transmission via contaminated surface environment (Bányai et al., 2018; Makimaa et al., 2020; Boone & Gerba, 2007).

Article Title: Molecular detection of SARS-CoV-2 and medically important respiratory and gastrointestinal virus pathogens on Thai currency
Article Snippet: .. The viral sequences were aligned using ClustalW multiple sequence alignment in the BioEdit version 7.0.5.2 , and a phylogenetic tree was constructed using MEGA 7.0.26 software ( https://megasoftware.net/ ) . ..

Generated:

Article Title: The Leray-XT COI primer pair is not suitable for observing ciliates and radiolarians
Article Snippet: .. From each of the selected mitochondrial genome sequences, the COI gene region was extracted and, together with the eleven selected COI sequences, a ClustalW ( ) multiple sequence alignment was generated in Bioedit. ..



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